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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 47 22

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 298 89

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 474 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 141 86

Repositories

Showing 10 of 143 repositories
  • BandageJS Public

    Bandage-style GFA graph viewer in the browser, a thin page over jbrowse-plugin-graphgenomeviewer's core

    GMOD/BandageJS's past year of commit activity
    TypeScript 2 GPL-3.0 0 0 0 Updated Oct 30, 2026
  • jbrowse-plugin-graphgenomeviewer Public
    GMOD/jbrowse-plugin-graphgenomeviewer's past year of commit activity
    TypeScript 1 GPL-3.0 0 0 0 Updated Oct 30, 2026
  • bandage-core Public

    Pangenome graph layout and drawing core utils: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer out

    GMOD/bandage-core's past year of commit activity
    TypeScript 1 GPL-3.0 0 0 0 Updated Oct 30, 2026
  • jb2hubs Public

    Source code for the JBrowse 2 genome hubs webite and data processing scripts

    GMOD/jb2hubs's past year of commit activity
    TypeScript 0 0 6 1 Updated Oct 30, 2026
  • Apollo3 Public

    Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.

    GMOD/Apollo3's past year of commit activity
    TypeScript 18 Apache-2.0 13 57 6 Updated Oct 29, 2026
  • ggtubemap Public

    Pangenome tube maps (sequenceTubeMap) as ggplot2 layers in R

    GMOD/ggtubemap's past year of commit activity
    JavaScript 0 0 0 0 Updated Oct 29, 2026
  • jbrowse-plugin-list Public

    List of plugins for the JBrowse 2 plugin store.

    GMOD/jbrowse-plugin-list's past year of commit activity
    TypeScript 3 5 0 1 Updated Oct 29, 2026
  • ggbandage Public

    Pangenome graph figures as ggplot2 layers, laid out by the Bandage engine from @jbrowse/bandage-core

    GMOD/ggbandage's past year of commit activity
    R 8 0 0 0 Updated Oct 29, 2026
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components's past year of commit activity
    TypeScript 298 Apache-2.0 89 55 3 Updated Oct 29, 2026
  • gfa-to-tabix Public

    Indexes a pangenome graph's GFA by genome coordinate, as two Tabix-indexed BED files

    GMOD/gfa-to-tabix's past year of commit activity
    Rust 1 Apache-2.0 0 0 0 Updated Oct 29, 2026
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